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ECPAS Ecm29 proteasome adaptor and scaffold [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100406038, updated on 8-Mar-2024

Summary

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Gene symbol
ECPAS
Gene description
Ecm29 proteasome adaptor and scaffold
See related
Ensembl:ENSCJAG00000017495
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
KIAA0368
Orthologs
human mouse all
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Genomic context

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See ECPAS in Genome Data Viewer
Location:
chromosome: 1
Exon count:
55
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 1 NC_071442.1 (156763824..156883391, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 1 NC_048383.1 (157980866..158101974, complement)

Chromosome 1 - NC_071442.1Genomic Context describing neighboring genes Neighboring gene tubulin beta-8 chain-like Neighboring gene olfactory receptor 2K2 Neighboring gene zinc finger protein 483 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome adapter and scaffold protein ECM29

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071442.1 Reference mCalJa1.2.pat.X

    Range
    156763824..156883391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009001202.5 → XP_008999450.2  proteasome adapter and scaffold protein ECM29 isoform X2

    UniProtKB/TrEMBL
    F7GA69
    Conserved Domains (3) summary
    sd00044
    Location:1077 → 1100
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1134 → 1219
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:10 → 516
    Ecm29; Proteasome stabilizer

  2. XM_035254570.2 → XP_035110461.1  proteasome adapter and scaffold protein ECM29 isoform X5

    UniProtKB/TrEMBL
    F7GA69
    Conserved Domains (3) summary
    sd00044
    Location:1083 → 1106
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1140 → 1225
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:16 → 522
    Ecm29; Proteasome stabilizer

  3. XM_035254579.2 → XP_035110470.1  proteasome adapter and scaffold protein ECM29 isoform X3

    UniProtKB/TrEMBL
    F7GA69
    Conserved Domains (3) summary
    sd00044
    Location:1077 → 1100
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1134 → 1219
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:10 → 516
    Ecm29; Proteasome stabilizer

  4. XM_035254595.2 → XP_035110486.1  proteasome adapter and scaffold protein ECM29 isoform X4

    UniProtKB/TrEMBL
    F7GA69
    Conserved Domains (3) summary
    sd00044
    Location:1025 → 1048
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1082 → 1167
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:1 → 464
    Ecm29; Proteasome stabilizer

  5. XM_035254562.2 → XP_035110453.1  proteasome adapter and scaffold protein ECM29 isoform X1

    UniProtKB/TrEMBL
    F7GA69
    Conserved Domains (3) summary
    sd00044
    Location:1089 → 1112
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1146 → 1231
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:22 → 528
    Ecm29; Proteasome stabilizer

  6. XM_035254600.2 → XP_035110491.1  proteasome adapter and scaffold protein ECM29 isoform X4

    UniProtKB/TrEMBL
    F7GA69
    Conserved Domains (3) summary
    sd00044
    Location:1025 → 1048
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:1082 → 1167
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:1 → 464
    Ecm29; Proteasome stabilizer

  7. XM_035254602.2 → XP_035110493.1  proteasome adapter and scaffold protein ECM29 isoform X6

    Conserved Domains (3) summary
    sd00044
    Location:770 → 793
    HEAT; HEAT repeat [structural motif]
    pfam12755
    Location:827 → 912
    Vac14_Fab1_bd; Vacuolar 14 Fab1-binding region
    pfam13001
    Location:182 → 209
    Ecm29; Proteasome stabilizer
Nucleotide Protein
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