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PRR11 proline rich 11 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100404759, updated on 8-Mar-2024

Summary

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Gene symbol
PRR11
Gene description
proline rich 11
See related
Ensembl:ENSCJAG00000001640
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See PRR11 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (89836909..89872218)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (92590904..92623488)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 37 Neighboring gene U2 spliceosomal RNA Neighboring gene spindle and kinetochore associated complex subunit 2 Neighboring gene SMG8 nonsense mediated mRNA decay factor Neighboring gene glycerophosphodiester phosphodiesterase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proline-rich protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    89836909..89872218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002748166.5 → XP_002748212.3  proline-rich protein 11

    UniProtKB/TrEMBL
    F7HXB3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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