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FBXW8 F-box and WD repeat domain containing 8 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100403711, updated on 8-Mar-2024

Summary

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Gene symbol
FBXW8
Gene description
F-box and WD repeat domain containing 8
See related
Ensembl:ENSCJAG00000009513
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 9 NC_071450.1 (116444703..116573541)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 9 NC_048391.1 (117516583..117643627)

Chromosome 9 - NC_071450.1Genomic Context describing neighboring genes Neighboring gene ring finger protein, transmembrane 2 Neighboring gene U6 spliceosomal RNA Neighboring gene harakiri, BCL2 interacting protein Neighboring gene tescalcin Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul7-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/WD repeat-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071450.1 Reference mCalJa1.2.pat.X

    Range
    116444703..116573541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035257753.2 → XP_035113644.1  F-box/WD repeat-containing protein 8

    UniProtKB/TrEMBL
    F7HS03, U3C2C9, U3F6G6
    Conserved Domains (4) summary
    PHA03378
    Location:10 → 94
    PHA03378; EBNA-3B; Provisional
    sd00039
    Location:213 → 253
    7WD40; WD40 repeat [structural motif]
    pfam12937
    Location:118 → 160
    F-box-like
    cl29593
    Location:168 → 501
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

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