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UBAP2L ubiquitin associated protein 2 like [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100403158, updated on 3-Apr-2024

Summary

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Gene symbol
UBAP2L
Gene description
ubiquitin associated protein 2 like
See related
Ensembl:ENSCJAG00000009677
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See UBAP2L in Genome Data Viewer
Location:
chromosome: 18
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 18 NC_071459.1 (8200117..8257571)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 18 NC_048400.1 (8208936..8265480)

Chromosome 18 - NC_071459.1Genomic Context describing neighboring genes Neighboring gene tropomyosin 3 Neighboring gene cilia and flagella associated protein 141 Neighboring gene chromosome 18 C1orf43 homolog Neighboring gene small nucleolar RNA SNORA58 Neighboring gene 60S ribosomal protein L18a-like Neighboring gene HCLS1 associated protein X-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-associated protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071459.1 Reference mCalJa1.2.pat.X

    Range
    8200117..8257571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054247708.1 → XP_054103683.1  ubiquitin-associated protein 2-like isoform X10

    UniProtKB/TrEMBL
    U3D9U1

  2. XM_054247698.1 → XP_054103673.1  ubiquitin-associated protein 2-like isoform X6

  3. XM_054247725.1 → XP_054103700.1  ubiquitin-associated protein 2-like isoform X19

    UniProtKB/TrEMBL
    U3BUG1

  4. XM_054247713.1 → XP_054103688.1  ubiquitin-associated protein 2-like isoform X12

  5. XM_054247728.1 → XP_054103703.1  ubiquitin-associated protein 2-like isoform X19

    UniProtKB/TrEMBL
    U3BUG1

  6. XM_054247693.1 → XP_054103668.1  ubiquitin-associated protein 2-like isoform X5

  7. XM_054247717.1 → XP_054103692.1  ubiquitin-associated protein 2-like isoform X14

    UniProtKB/TrEMBL
    F7I566

  8. XM_054247720.1 → XP_054103695.1  ubiquitin-associated protein 2-like isoform X16

  9. XM_054247697.1 → XP_054103672.1  ubiquitin-associated protein 2-like isoform X6

  10. XM_054247707.1 → XP_054103682.1  ubiquitin-associated protein 2-like isoform X10

    UniProtKB/TrEMBL
    U3D9U1

  11. XM_054247729.1 → XP_054103704.1  ubiquitin-associated protein 2-like isoform X19

    UniProtKB/TrEMBL
    U3BUG1

  12. XM_054247700.1 → XP_054103675.1  ubiquitin-associated protein 2-like isoform X8

  13. XM_054247714.1 → XP_054103689.1  ubiquitin-associated protein 2-like isoform X14

    UniProtKB/TrEMBL
    F7I566

  14. XM_054247701.1 → XP_054103676.1  ubiquitin-associated protein 2-like isoform X9

  15. XM_054247709.1 → XP_054103684.1  ubiquitin-associated protein 2-like isoform X12

  16. XM_054247718.1 → XP_054103693.1  ubiquitin-associated protein 2-like isoform X16

  17. XM_054247711.1 → XP_054103686.1  ubiquitin-associated protein 2-like isoform X13

  18. XM_054247719.1 → XP_054103694.1  ubiquitin-associated protein 2-like isoform X17

  19. XM_054247695.1 → XP_054103670.1  ubiquitin-associated protein 2-like isoform X6

  20. XM_054247690.1 → XP_054103665.1  ubiquitin-associated protein 2-like isoform X3

  21. XM_054247702.1 → XP_054103677.1  ubiquitin-associated protein 2-like isoform X10

    UniProtKB/TrEMBL
    U3D9U1

  22. XM_054247692.1 → XP_054103667.1  ubiquitin-associated protein 2-like isoform X5

  23. XM_054247703.1 → XP_054103678.1  ubiquitin-associated protein 2-like isoform X11

  24. XM_054247688.1 → XP_054103663.1  ubiquitin-associated protein 2-like isoform X1

  25. XM_054247722.1 → XP_054103697.1  ubiquitin-associated protein 2-like isoform X18

  26. XM_054247724.1 → XP_054103699.1  ubiquitin-associated protein 2-like isoform X19

    UniProtKB/TrEMBL
    U3BUG1

  27. XM_054247699.1 → XP_054103674.1  ubiquitin-associated protein 2-like isoform X7

  28. XM_054247715.1 → XP_054103690.1  ubiquitin-associated protein 2-like isoform X15

  29. XM_054247721.1 → XP_054103696.1  ubiquitin-associated protein 2-like isoform X17

  30. XM_054247689.1 → XP_054103664.1  ubiquitin-associated protein 2-like isoform X2

  31. XM_054247696.1 → XP_054103671.1  ubiquitin-associated protein 2-like isoform X7

  32. XM_054247691.1 → XP_054103666.1  ubiquitin-associated protein 2-like isoform X4

  33. XM_054247704.1 → XP_054103679.1  ubiquitin-associated protein 2-like isoform X11

  34. XM_054247723.1 → XP_054103698.1  ubiquitin-associated protein 2-like isoform X18

  35. XM_054247706.1 → XP_054103681.1  ubiquitin-associated protein 2-like isoform X10

    UniProtKB/TrEMBL
    U3D9U1

  36. XM_054247726.1 → XP_054103701.1  ubiquitin-associated protein 2-like isoform X19

    UniProtKB/TrEMBL
    U3BUG1

  37. XM_054247712.1 → XP_054103687.1  ubiquitin-associated protein 2-like isoform X12

  38. XM_054247710.1 → XP_054103685.1  ubiquitin-associated protein 2-like isoform X11

Nucleotide Protein
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