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RNF17 ring finger protein 17 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100401748, updated on 8-Mar-2024

Summary

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Gene symbol
RNF17
Gene description
ring finger protein 17
See related
Ensembl:ENSCJAG00000018937
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See RNF17 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 5 NC_071446.1 (140148246..140256121)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 5 NC_048387.1 (142880734..142988820)

Chromosome 5 - NC_071446.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118153918 Neighboring gene transmembrane protein 161B-like Neighboring gene U1 spliceosomal RNA Neighboring gene centromere protein J Neighboring gene uncharacterized LOC100895461 Neighboring gene small nucleolar RNA SNORA3/SNORA45 family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
RING finger protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071446.1 Reference mCalJa1.2.pat.X

    Range
    140148246..140256121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008998032.5 → XP_008996280.3  RING finger protein 17 isoform X1

  2. XM_054256717.1 → XP_054112692.1  RING finger protein 17 isoform X4

  3. XM_054256716.1 → XP_054112691.1  RING finger protein 17 isoform X3

  4. XM_035302364.2 → XP_035158255.2  RING finger protein 17 isoform X2

  5. XM_054256715.1 → XP_054112690.1  RING finger protein 17 isoform X2

Nucleotide Protein
Heading Accession and Version

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