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NEMP2 nuclear envelope integral membrane protein 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100400652, updated on 8-Mar-2024

Summary

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Gene symbol
NEMP2
Gene description
nuclear envelope integral membrane protein 2
See related
Ensembl:ENSCJAG00000005743
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
TMEM194B
Orthologs
human mouse all
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Genomic context

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See NEMP2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 6 NC_071447.1 (35008678..35102748)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 6 NC_048388.1 (36010364..36104716)

Chromosome 6 - NC_071447.1Genomic Context describing neighboring genes Neighboring gene NGFI-A binding protein 1 Neighboring gene U7 small nuclear RNA Neighboring gene major facilitator superfamily domain containing 6 Neighboring gene uncharacterized LOC128932470 Neighboring gene cyclin-dependent kinase 8-like Neighboring gene inositol polyphosphate-1-phosphatase Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear envelope integral membrane protein 2
Names
transmembrane protein 194B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071447.1 Reference mCalJa1.2.pat.X

    Range
    35008678..35102748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035304235.2 → XP_035160126.1  nuclear envelope integral membrane protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A5F4W360, F7IFN4
    Conserved Domains (1) summary
    pfam10225
    Location:142 → 389
    NEMP; NEMP family

  2. XM_017973575.4 → XP_017829064.1  nuclear envelope integral membrane protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A5F4W360

  3. XM_002749565.5 → XP_002749611.1  nuclear envelope integral membrane protein 2 isoform X1

    See identical proteins and their annotated locations for XP_002749611.1

    UniProtKB/TrEMBL
    A0A5F4W360, F7IFN4
    Related
    ENSCJAP00000010536.1
    Conserved Domains (1) summary
    pfam10225
    Location:142 → 389
    NEMP; NEMP family

  4. XM_017973576.3 → XP_017829065.1  nuclear envelope integral membrane protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A5F4W360

  5. XM_035304236.2 → XP_035160127.1  nuclear envelope integral membrane protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A5F4W360
    Conserved Domains (1) summary
    pfam10225
    Location:81 → 328
    NEMP; NEMP family

  6. XM_017973578.3 → XP_017829067.1  nuclear envelope integral membrane protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A5F4W360

RNA

  1. XR_004744533.2 RNA Sequence

  2. XR_004744532.2 RNA Sequence

Nucleotide Protein
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