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KCTD13 potassium channel tetramerization domain containing 13 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100397681, updated on 8-Mar-2024

Summary

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Gene symbol
KCTD13
Gene description
potassium channel tetramerization domain containing 13
See related
Ensembl:ENSCJAG00000007098
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See KCTD13 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 12 NC_071453.1 (27388162..27407260)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 12 NC_048394.1 (27255900..27274993)

Chromosome 12 - NC_071453.1Genomic Context describing neighboring genes Neighboring gene TAO kinase 2 Neighboring gene uncharacterized LOC108587803 Neighboring gene transmembrane protein 219 Neighboring gene uncharacterized LOC128929251 Neighboring gene aspartate beta-hydroxylase domain containing 1 Neighboring gene seizure related 6 homolog like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Cul3-RING ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1
Names
potassium channel tetramerisation domain containing 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071453.1 Reference mCalJa1.2.pat.X

    Range
    27388162..27407260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017978854.3 → XP_017834343.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 isoform X3

  2. XM_054242752.1 → XP_054098727.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 isoform X4

  3. XM_017978853.3 → XP_017834342.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 isoform X1

  4. XM_002756047.5 → XP_002756093.1  BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 isoform X2

    See identical proteins and their annotated locations for XP_002756093.1

    UniProtKB/TrEMBL
    F7C0X8, U3DBP3
    Related
    ENSCJAP00000013184.2
    Conserved Domains (1) summary
    cl02518
    Location:43 → 133
    BTB; BTB/POZ domain
Nucleotide Protein
Heading Accession and Version

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