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NCCRP1 NCCRP1, F-box associated domain containing [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100395076, updated on 8-Mar-2024

Summary

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Gene symbol
NCCRP1
Gene description
NCCRP1, F-box associated domain containing
See related
Ensembl:ENSCJAG00000014055
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See NCCRP1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 22 NC_071463.1 (33257681..33262617)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 22 NC_048404.1 (34664291..34669227)

Chromosome 22 - NC_071463.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 7, tartrate resistant (putative) Neighboring gene p21 (RAC1) activated kinase 4 Neighboring gene syncollin Neighboring gene interferon lambda 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 50
Names
non-specific cytotoxic cell receptor protein 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071463.1 Reference mCalJa1.2.pat.X

    Range
    33257681..33262617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002762093.4 → XP_002762139.1  F-box only protein 50

    See identical proteins and their annotated locations for XP_002762139.1

    UniProtKB/TrEMBL
    F7AVG6
    Related
    ENSCJAP00000025842.1
    Conserved Domains (1) summary
    pfam04300
    Location:148 → 268
    FBA; F-box associated region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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