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ZFAND1 zinc finger AN1-type containing 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100395039, updated on 8-Mar-2024

Summary

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Gene symbol
ZFAND1
Gene description
zinc finger AN1-type containing 1
See related
Ensembl:ENSCJAG00000000421
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See ZFAND1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 16 NC_071457.1 (43323628..43343511)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 16 NC_048398.1 (43437544..43457794)

Chromosome 16 - NC_071457.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 16 Neighboring gene uncharacterized LOC128929848 Neighboring gene charged multivesicular body protein 4C Neighboring gene solute carrier family 10 member 5 Neighboring gene inositol monophosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in stress granule disassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AN1-type zinc finger protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071457.1 Reference mCalJa1.2.pat.X

    Range
    43323628..43343511
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008982837.4 → XP_008981085.1  AN1-type zinc finger protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A5F4WCN6, A0A8I3XDN6
    Conserved Domains (1) summary
    pfam01428
    Location:10 → 46
    zf-AN1; AN1-like Zinc finger

  2. XM_002759034.6 → XP_002759080.1  AN1-type zinc finger protein 1 isoform X4

    See identical proteins and their annotated locations for XP_002759080.1

    UniProtKB/TrEMBL
    A0A8I3XDN6, F6SE90
    Related
    ENSCJAP00000000718.2
    Conserved Domains (1) summary
    pfam01428
    Location:10 → 46
    zf-AN1; AN1-like Zinc finger

  3. XM_054246417.1 → XP_054102392.1  AN1-type zinc finger protein 1 isoform X6

  4. XM_035277569.2 → XP_035133460.1  AN1-type zinc finger protein 1 isoform X1

    Conserved Domains (1) summary
    pfam01428
    Location:104 → 140
    zf-AN1; AN1-like Zinc finger

  5. XM_035277570.2 → XP_035133461.1  AN1-type zinc finger protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3W1A5
    Conserved Domains (1) summary
    pfam01428
    Location:104 → 140
    zf-AN1; AN1-like Zinc finger

  6. XM_035277571.2 → XP_035133462.1  AN1-type zinc finger protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8I3XDN6
    Conserved Domains (1) summary
    pfam01428
    Location:50 → 86
    zf-AN1; AN1-like Zinc finger
Nucleotide Protein
Heading Accession and Version

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