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CDCP1 CUB domain containing protein 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100394195, updated on 6-Jun-2024

Summary

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Gene symbol
CDCP1
Gene description
CUB domain containing protein 1
See related
Ensembl:ENSCJAG00000001944
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 15 NC_071456.1 (21579725..21651238, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 15 NC_048397.1 (22301380..22369999, complement)

Chromosome 15 - NC_071456.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 3 member B Neighboring gene small nucleolar RNA SNORA9 Neighboring gene cysteine and glycine-rich protein 2 pseudogene Neighboring gene transmembrane protein 158

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CUB domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071456.1 Reference mCalJa1.2.pat.X

    Range
    21579725..21651238 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002758268.5 → XP_002758314.3  CUB domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A5K1UUH2, F7F146, U3B820

  2. XM_054245557.1 → XP_054101532.1  CUB domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    F7F146, U3B820
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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