TP53BP1 tumor protein p53 binding protein 1 [Callithrix jacchus (white-tufted-ear marmoset)] - Gene

Summary

Gene symbol: TP53BP1
Gene description: tumor protein p53 binding protein 1
See related: Ensembl:ENSCJAG00000002786
Gene type: protein coding
RefSeq status: MODEL
Organism: Callithrix jacchus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 32

Annotation release	Status	Assembly	Chr	Location
RS_2023_03	current	mCalJa1.2.pat.X (GCF_011100555.1)	10	NC_071451.1 (26886530..27007851, complement)
105	previous assembly	Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1)	10	NC_048392.1 (27658984..27784753, complement)

Chromosome 10 - NC_071451.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

REN36928 (e-PCR)
- UniSTS:361728

REN36931 (e-PCR)
- UniSTS:361731

REN36934 (e-PCR)
- UniSTS:361734

ECD22901 (e-PCR)
- UniSTS:303886

ECD06704 (e-PCR)
- UniSTS:287764

REN36970 (e-PCR)
- UniSTS:361770

stSG627729 (e-PCR)
- UniSTS:457780

RH44505 (e-PCR)
- UniSTS:74295

REN36984 (e-PCR)
- UniSTS:361784

REN36997 (e-PCR)
- UniSTS:361797

ECD20899 (e-PCR)
- UniSTS:301897

ECD16788 (e-PCR)
- UniSTS:297803

REN37016 (e-PCR)
- UniSTS:361816

REN37019 (e-PCR)
- UniSTS:361819

REN37020 (e-PCR)
- UniSTS:361820

REN37021 (e-PCR)
- UniSTS:361821

REN37022 (e-PCR)
- UniSTS:361822

REN37023 (e-PCR)
- UniSTS:361823

ECD11927 (e-PCR)
- UniSTS:292960

REN37024 (e-PCR)
- UniSTS:361824

ECD04235 (e-PCR)
- UniSTS:285313

RH68009 (e-PCR)
- UniSTS:18818

REN36817 (e-PCR)
- UniSTS:361617

MARC_23414-23415:1024951060:3 (e-PCR)
- UniSTS:268690

REN36830 (e-PCR)
- UniSTS:361630

REN36831 (e-PCR)
- UniSTS:361631

REN36832 (e-PCR)
- UniSTS:361632

REN36833 (e-PCR)
- UniSTS:361633

REN36835 (e-PCR)
- UniSTS:361635

ECD16620 (e-PCR)
- UniSTS:297635

REN36838 (e-PCR)
- UniSTS:361638

REN36839 (e-PCR)
- UniSTS:361639

REN36841 (e-PCR)
- UniSTS:361641

REN36873 (e-PCR)
- UniSTS:361673

ECD12557 (e-PCR)
- UniSTS:293590

ECD07429 (e-PCR)
- UniSTS:288483

TP53BP1_8682 (e-PCR)
- UniSTS:467947

REN36911 (e-PCR)
- UniSTS:361711

REN36919 (e-PCR)
- UniSTS:361719

REN36924 (e-PCR)
- UniSTS:361724

REN36927 (e-PCR)
- UniSTS:361727

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables histone binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in DNA damage checkpoint signaling	IEA Inferred from Electronic Annotation more info	PubMed
involved_in positive regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: TP53-binding protein 1

Names: tumor suppressor p53 binding protein 1-like protein; tumor suppressor p53-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

NC_071451.1 Reference mCalJa1.2.pat.X

Range

26886530..27007851 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_035259465.2 → XP_035115356.2 TP53-binding protein 1 isoform X2

UniProtKB/TrEMBL

B0KWF8
XM_035259463.2 → XP_035115354.2 TP53-binding protein 1 isoform X2

UniProtKB/TrEMBL

B0KWF8
XM_009005328.4 → XP_009003576.3 TP53-binding protein 1 isoform X1

UniProtKB/TrEMBL

F6TFC1, U3D3Y0
XM_035259464.2 → XP_035115355.2 TP53-binding protein 1 isoform X2

UniProtKB/TrEMBL

B0KWF8
XM_054239556.1 → XP_054095531.1 TP53-binding protein 1 isoform X3

UniProtKB/TrEMBL

F6TFC1, U3D3Y0
XM_035259469.2 → XP_035115360.2 TP53-binding protein 1 isoform X5
XM_035259468.2 → XP_035115359.2 TP53-binding protein 1 isoform X4

UniProtKB/TrEMBL

F6TFC1, U3D3Y0