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XKR6 XK related 6 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100391622, updated on 8-Mar-2024

Summary

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Gene symbol
XKR6
Gene description
XK related 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 13 NC_071454.1 (7747991..8071798)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 13 NC_048395.1 (7837227..8143241)

Chromosome 13 - NC_071454.1Genomic Context describing neighboring genes Neighboring gene myotubularin related protein 9 Neighboring gene 60S ribosomal protein L19-like Neighboring gene U1 spliceosomal RNA Neighboring gene L-lactate dehydrogenase B chain-like Neighboring gene uncharacterized LOC118146727 Neighboring gene uncharacterized LOC118146728 Neighboring gene PIN2 (TERF1) interacting telomerase inhibitor 1 Neighboring gene SRY-box transcription factor 7 Neighboring gene chromosome 13 C8orf74 homolog Neighboring gene RP1 like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XK-related protein 6
Names
XK, Kell blood group complex subunit-related family, member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071454.1 Reference mCalJa1.2.pat.X

    Range
    7747991..8071798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035269864.2 → XP_035125755.1  XK-related protein 6

    Conserved Domains (1) summary
    pfam09815
    Location:128 → 491
    XK-related; XK-related protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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