U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PLPPR1 phospholipid phosphatase related 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100391157, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PLPPR1
Gene description
phospholipid phosphatase related 1
See related
Ensembl:ENSCJAG00000016264
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Also known as
LPPR1
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PLPPR1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 1 NC_071442.1 (146156130..146515405)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 1 NC_048383.1 (147385822..147744074)

Chromosome 1 - NC_071442.1Genomic Context describing neighboring genes Neighboring gene histone H3.3A-like Neighboring gene actin, cytoplasmic 2-like Neighboring gene U1 spliceosomal RNA Neighboring gene acyl-coenzyme A amino acid N-acyltransferase 1-like Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phospholipid phosphatase-related protein type 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071442.1 Reference mCalJa1.2.pat.X

    Range
    146156130..146515405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035253096.2 → XP_035108987.1  phospholipid phosphatase-related protein type 1

    UniProtKB/TrEMBL
    F7I2M9
    Conserved Domains (1) summary
    cd03384
    Location:123 → 272
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

  2. XM_009000342.4 → XP_008998590.1  phospholipid phosphatase-related protein type 1

    See identical proteins and their annotated locations for XP_008998590.1

    UniProtKB/TrEMBL
    F7I2M9
    Related
    ENSCJAP00000029964.2
    Conserved Domains (1) summary
    cd03384
    Location:123 → 272
    PAP2_wunen; PAP2, wunen subfamily. Most likely a family of membrane associated phosphatidic acid phosphatases. Wunen is a drosophila protein expressed in the central nervous system, which provides repellent activity towards primordial germ cells (PGCs), controls the ...

  3. XM_054258389.1 → XP_054114364.1  phospholipid phosphatase-related protein type 1

    UniProtKB/TrEMBL
    F7I2M9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.