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TADA2B transcriptional adaptor 2B [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100389874, updated on 8-Mar-2024

Summary

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Gene symbol
TADA2B
Gene description
transcriptional adaptor 2B
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 3 NC_071444.1 (183484056..183497837)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 3 NC_048385.1 (185996383..186010099)

Chromosome 3 - NC_071444.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 14 Neighboring gene uncharacterized LOC108591008 Neighboring gene cilia and flagella associated protein 184 Neighboring gene uncharacterized LOC103792134 Neighboring gene GrpE like 1, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA-type complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcriptional adapter 2-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071444.1 Reference mCalJa1.2.pat.X

    Range
    183484056..183497837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003732535.5 → XP_003732583.2  transcriptional adapter 2-beta isoform X1

    UniProtKB/TrEMBL
    U3EXG3
    Conserved Domains (1) summary
    COG5114
    Location:6 → 415
    COG5114; Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]

  2. XM_035294140.2 → XP_035150031.1  transcriptional adapter 2-beta isoform X2

    Conserved Domains (1) summary
    COG5114
    Location:16 → 340
    COG5114; Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]
Nucleotide Protein
Heading Accession and Version

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