U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FOXO4 forkhead box O4 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100384968, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
FOXO4
Gene description
forkhead box O4
See related
Ensembl:ENSCJAG00000013651
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) X NC_071464.1 (65265714..65273321)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) X NC_048405.1 (66769865..66777472)

Chromosome X - NC_071464.1Genomic Context describing neighboring genes Neighboring gene suppressor of cytokine signaling 5-like Neighboring gene sorting nexin 12 Neighboring gene chromosome X CXorf65 homolog Neighboring gene interleukin 2 receptor subunit gamma

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
forkhead box protein O4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071464.1 Reference mCalJa1.2.pat.X

    Range
    65265714..65273321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002762971.5 → XP_002763017.1  forkhead box protein O4

    See identical proteins and their annotated locations for XP_002763017.1

    UniProtKB/TrEMBL
    A0A2R8N2Z5, F6UYC2, U3E3C7
    Related
    ENSCJAP00000025122.2
    Conserved Domains (4) summary
    cd00059
    Location:101 → 181
    FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
    pfam16676
    Location:465 → 503
    FOXO-TAD; Transactivation domain of FOXO protein family
    cl25865
    Location:4 → 83
    Trypan_PARP; Procyclic acidic repetitive protein (PARP)
    cl26464
    Location:216 → 467
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.