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SYT9 synaptotagmin 9 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100343696, updated on 8-Mar-2024

Summary

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Gene symbol
SYT9
Gene description
synaptotagmin 9
See related
Ensembl:ENSOCUG00000017504
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See SYT9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 1 NC_067374.1 (162421998..162845988)

Chromosome 1 - NC_067374.1Genomic Context describing neighboring genes Neighboring gene NLR family pyrin domain containing 14 Neighboring gene RBMX like 2 Neighboring gene uncharacterized LOC127484198 Neighboring gene olfactomedin like 1 Neighboring gene PPFIA binding protein 2 Neighboring gene uncharacterized LOC127484219

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067374.1 Chromosome 1 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dense core granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-9
Names
synaptotagmin IX

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067374.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    162421998..162845988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_051823632.1 → XP_051679592.1  synaptotagmin-9 isoform X3

  2. XM_051823610.1 → XP_051679570.1  synaptotagmin-9 isoform X3

  3. XM_051823669.1 → XP_051679629.1  synaptotagmin-9 isoform X3

  4. XM_051823692.1 → XP_051679652.1  synaptotagmin-9 isoform X3

  5. XM_051823654.1 → XP_051679614.1  synaptotagmin-9 isoform X3

  6. XM_051823662.1 → XP_051679622.1  synaptotagmin-9 isoform X3

  7. XM_051823599.1 → XP_051679559.1  synaptotagmin-9 isoform X3

  8. XM_051823646.1 → XP_051679606.1  synaptotagmin-9 isoform X3

  9. XM_051823642.1 → XP_051679602.1  synaptotagmin-9 isoform X3

  10. XM_051823684.1 → XP_051679644.1  synaptotagmin-9 isoform X3

  11. XM_051823658.1 → XP_051679618.1  synaptotagmin-9 isoform X3

  12. XM_051823678.1 → XP_051679638.1  synaptotagmin-9 isoform X3

  13. XM_051823691.1 → XP_051679651.1  synaptotagmin-9 isoform X3

  14. XM_051823590.1 → XP_051679550.1  synaptotagmin-9 isoform X3

  15. XM_051823621.1 → XP_051679581.1  synaptotagmin-9 isoform X3

  16. XM_051823583.1 → XP_051679543.1  synaptotagmin-9 isoform X1

  17. XM_008265569.3 → XP_008263791.2  synaptotagmin-9 isoform X2

RNA

  1. XR_007910949.1 RNA Sequence

Nucleotide Protein
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