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lgr6 leucine rich repeat containing G protein-coupled receptor 6 [ Danio rerio (zebrafish) ]

Gene ID: 100330212, updated on 27-Mar-2024

Summary

Gene symbol
lgr6
Gene description
leucine rich repeat containing G protein-coupled receptor 6
See related
Ensembl:ENSDARG00000098308
Gene type
protein coding
RefSeq status
INFERRED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
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Genomic context

See lgr6 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
18
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (5210362..5365561, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (5296912..5429412, complement)

Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene patatin-like phospholipase domain containing 1 Neighboring gene potassium voltage-gated channel, shaker-related subfamily, member 10a Neighboring gene transcription factor PU.1-like Neighboring gene adenosine receptor A1 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
leucine-rich repeat-containing G-protein coupled receptor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001423839.1NP_001410768.1  leucine-rich repeat-containing G-protein coupled receptor 6 precursor

    Status: INFERRED

    Source sequence(s)
    CABZ01030037, CABZ01030038, CABZ01030039, CR936540
    UniProtKB/Swiss-Prot
    P0DM44
    UniProtKB/TrEMBL
    A0A8M6YW50

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007134.7 Reference GRCz11 Primary Assembly

    Range
    5210362..5365561 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017353776.2XP_017209265.2  leucine-rich repeat-containing G-protein coupled receptor 6

    Related
    ENSDART00000166548.2
    Conserved Domains (5) summary
    smart00013
    Location:2864
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:324338
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:6285
    LRR_RI; leucine-rich repeat [structural motif]
    cd15362
    Location:554829
    7tmA_LGR6; leucine-rich repeats-containing G protein-coupled receptor 6, the class A of 7-transmembrane GPCRs
    cl26793
    Location:53448
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional