U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PHKG2 phosphorylase kinase catalytic subunit gamma 2 [ Sus scrofa (pig) ]

Gene ID: 100310801, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
PHKG2provided by VGNC
Official Full Name
phosphorylase kinase catalytic subunit gamma 2provided by VGNC
Primary source
VGNC:VGNC:91395
See related
Ensembl:ENSSSCG00000007788
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 14.3), lung (RPKM 9.9) and 8 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (17640790..17656765, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 3 NC_010445.3 (18087281..18103213, complement)

Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene zinc finger protein 629 Neighboring gene ring finger protein 40 Neighboring gene cilia and flagella associated protein 119 Neighboring gene transmembrane protein 265 Neighboring gene Snf2 related CREBBP activator protein Neighboring gene fibrosin

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Porcine gene discovery by normalized cDNA-library sequencing and EST cluster assembly. Fahrenkrug SC, et al. Mamm Genome, 2002 Aug. PMID 12226715
  2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphorylase kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphorylase kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
phosphorylase b kinase gamma catalytic chain, liver/testis isoform
Names
phosphorylase kinase, gamma 2 (testis)
NP_001159789.2
XP_005653054.1
XP_013847791.1
XP_020941287.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166317.2 → NP_001159789.2  phosphorylase b kinase gamma catalytic chain, liver/testis isoform

    Status: VALIDATED

    Source sequence(s)
    BG895497, BQ604384, EU169240
    UniProtKB/TrEMBL
    C9VXR3
    Related
    ENSSSCP00000008317.2, ENSSSCT00000008536.4
    Conserved Domains (2) summary
    cd14181
    Location:13 → 291
    STKc_PhKG2; Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit
    pfam00069
    Location:24 → 291
    Pkinase; Protein kinase domain

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

    Range
    17640790..17656765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005652997.3 → XP_005653054.1  phosphorylase b kinase gamma catalytic chain, liver/testis isoform isoform X1

    See identical proteins and their annotated locations for XP_005653054.1

    UniProtKB/TrEMBL
    A0A4X1TMH6, C9VXR3, F1RG75
    Conserved Domains (2) summary
    cd14181
    Location:13 → 291
    STKc_PhKG2; Catalytic domain of the Serine/Threonine Kinase, Phosphorylase kinase Gamma 2 subunit
    pfam00069
    Location:24 → 291
    Pkinase; Protein kinase domain

  2. XM_013992337.2 → XP_013847791.1  phosphorylase b kinase gamma catalytic chain, liver/testis isoform isoform X2

    UniProtKB/TrEMBL
    A0A8D0TYP6
    Conserved Domains (1) summary
    cl21453
    Location:13 → 214
    PKc_like; Protein Kinases, catalytic domain

  3. XM_021085628.1 → XP_020941287.1  phosphorylase b kinase gamma catalytic chain, liver/testis isoform isoform X2

    UniProtKB/TrEMBL
    A0A8D0TYP6
    Conserved Domains (1) summary
    cl21453
    Location:13 → 214
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.