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SUZ12 SUZ12 polycomb repressive complex 2 subunit [ Sus scrofa (pig) ]

Gene ID: 100294712, updated on 8-Mar-2024

Summary

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Official Symbol
SUZ12provided by VGNC
Official Full Name
SUZ12 polycomb repressive complex 2 subunitprovided by VGNC
Primary source
VGNC:VGNC:93638
See related
Ensembl:ENSSSCG00000017744
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in spleen (RPKM 10.4), lung (RPKM 7.8) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See SUZ12 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (42983597..43032671, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (44772363..44821466, complement)

Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene transcription elongation factor, mitochondrial Neighboring gene ATPase family AAA domain containing 5 Neighboring gene cytokine receptor like factor 3 Neighboring gene uncharacterized LOC110256057 Neighboring gene UTP6 small subunit processome component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESC/E(Z) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycomb protein SUZ12
Names
suppressor of zeste 12 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

    Range
    42983597..43032671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005669065.3 → XP_005669122.1  polycomb protein SUZ12 isoform X2

    UniProtKB/TrEMBL
    A0A287A167, A0A4X1TGA6, A0A8D0J3M5
    Related
    ENSSSCP00000037669.2, ENSSSCT00000052927.2
    Conserved Domains (1) summary
    pfam09733
    Location:521 → 655
    VEFS-Box; VEFS-Box of polycomb protein

  2. XM_003131745.5 → XP_003131793.1  polycomb protein SUZ12 isoform X1

    UniProtKB/TrEMBL
    A0A4X1TK80, A0A8D0J3M5, F1RKV6
    Related
    ENSSSCP00000018799.4, ENSSSCT00000019312.5
    Conserved Domains (1) summary
    pfam09733
    Location:544 → 678
    VEFS-Box; VEFS-Box of polycomb protein

  3. XM_005669069.3 → XP_005669126.1  polycomb protein SUZ12 isoform X3

    See identical proteins and their annotated locations for XP_005669126.1

    UniProtKB/TrEMBL
    A0A8D0J3M5
    Conserved Domains (1) summary
    pfam09733
    Location:469 → 603
    VEFS-Box; VEFS-Box of polycomb protein
Nucleotide Protein
Heading Accession and Version

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