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TAF2 TATA-box binding protein associated factor 2 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100225920, updated on 8-Mar-2024

Summary

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Gene symbol
TAF2
Gene description
TATA-box binding protein associated factor 2
See related
Ensembl:ENSTGUG00000012376
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See TAF2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
26
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 2 NC_044213.2 (137735010..137796973, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 2 NC_045000.1 (139398459..139460742, complement)

Chromosome 2 - NC_044213.2Genomic Context describing neighboring genes Neighboring gene cellular communication network factor 3 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 2 Neighboring gene DNA replication and sister chromatid cohesion 1 Neighboring gene DEP domain containing MTOR interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 2
Names
TBP-associated factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044213.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    137735010..137796973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030266612.3 → XP_030122472.1  transcription initiation factor TFIID subunit 2 isoform X2

    UniProtKB/TrEMBL
    A0A674GQ55
    Conserved Domains (1) summary
    cd09839
    Location:18 → 512
    M1_like_TAF2; TATA binding protein (TBP) associated factor 2

  2. XM_012572040.4 → XP_012427494.1  transcription initiation factor TFIID subunit 2 isoform X3

    UniProtKB/TrEMBL
    A0A674GQ55
    Related
    ENSTGUP00000024535.1
    Conserved Domains (1) summary
    cd09839
    Location:18 → 513
    M1_like_TAF2; TATA binding protein (TBP) associated factor 2

  3. XM_030266610.3 → XP_030122470.1  transcription initiation factor TFIID subunit 2 isoform X1

    UniProtKB/TrEMBL
    A0A674GQ55, A0A674GVR6
    Related
    ENSTGUP00000026513.1
    Conserved Domains (1) summary
    cd09839
    Location:18 → 513
    M1_like_TAF2; TATA binding protein (TBP) associated factor 2
Nucleotide Protein
Heading Accession and Version

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