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LOC100224866 carboxypeptidase A1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100224866, updated on 13-Aug-2024

Summary

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Gene symbol
LOC100224866
Gene description
carboxypeptidase A1
See related
Ensembl:ENSTGUG00000001912
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
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Genomic context

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Location:
chromosome: 1A
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 1A NC_044212.2 (1214088..1217849)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 1A NC_044999.1 (1170928..1174684)

Chromosome 1A - NC_044212.2Genomic Context describing neighboring genes Neighboring gene carboxypeptidase A2 Neighboring gene carboxypeptidase A1 Neighboring gene centrosomal protein 41 Neighboring gene mesoderm specific transcript Neighboring gene COPI coat complex subunit gamma 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044212.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    1214088..1217849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002187557.5 → XP_002187593.4  carboxypeptidase A1 isoform X1

    UniProtKB/TrEMBL
    H0YUK5
    Conserved Domains (1) summary
    cd03870
    Location:127 → 427
    M14_CPA; Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup

  2. XM_041720828.1 → XP_041576762.1  carboxypeptidase A1 isoform X2

    Conserved Domains (2) summary
    pfam02244
    Location:40 → 109
    Propep_M14; Carboxypeptidase activation peptide
    cl11393
    Location:127 → 348
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials