RNF170 ring finger protein 170 [Taeniopygia guttata (zebra finch)] - Gene

Summary

Gene symbol: RNF170
Gene description: ring finger protein 170
See related: Ensembl:ENSTGUG00000019577
Gene type: protein coding
RefSeq status: MODEL
Organism: Taeniopygia guttata
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs: human mouse all
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Genomic context

Location:: chromosome: Z

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
106	current	bTaeGut1.4.pri (GCF_003957565.2)	Z	NC_044241.2 (4514797..4539015)
105	previous assembly	bTaeGut2.pat.W.v2 (GCF_008822105.2)	Z	NC_045027.1 (5277402..5301667)

Chromosome Z - NC_044241.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ubiquitin protein ligase activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: E3 ubiquitin-protein ligase RNF170

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

NC_044241.2 Reference bTaeGut1.4.pri Primary Assembly

Range

4514797..4539015

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_002189428.5 → XP_002189464.1 E3 ubiquitin-protein ligase RNF170 isoform X1

See identical proteins and their annotated locations for XP_002189464.1

UniProtKB/TrEMBL

A0A674H4J4

Related

ENSTGUP00000029682.1

Conserved Domains (2) summary

cd16553
Location:87 → 130

RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins

pfam06803
Location:202 → 237

DUF1232; Protein of unknown function (DUF1232)
XM_030258129.3 → XP_030113989.1 E3 ubiquitin-protein ligase RNF170 isoform X1

UniProtKB/TrEMBL

A0A674H4J4

Conserved Domains (2) summary

cd16553
Location:87 → 130

RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins

pfam06803
Location:202 → 237

DUF1232; Protein of unknown function (DUF1232)
XM_030258131.3 → XP_030113991.1 E3 ubiquitin-protein ligase RNF170 isoform X3

Conserved Domains (2) summary

cd16553
Location:87 → 130

RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins

pfam06803
Location:167 → 202

DUF1232; Protein of unknown function (DUF1232)
XM_012577382.4 → XP_012432836.1 E3 ubiquitin-protein ligase RNF170 isoform X4

See identical proteins and their annotated locations for XP_012432836.1

Conserved Domains (2) summary

cd16553
Location:3 → 46

RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins

pfam06803
Location:118 → 153

DUF1232; Protein of unknown function (DUF1232)
XM_041711317.1 → XP_041567251.1 E3 ubiquitin-protein ligase RNF170 isoform X2

Conserved Domains (2) summary

cd16553
Location:57 → 100

RING-HC_RNF170; RING finger, HC subclass, found in RING finger protein 170 (RNF170) and similar proteins

cl01318
Location:172 → 213

DUF1232; Protein of unknown function (DUF1232)