ptgr2 prostaglandin reductase 2 [Salmo salar (Atlantic salmon)] - Gene

Summary

Gene symbol: ptgr2
Gene description: prostaglandin reductase 2
See related: Ensembl:ENSSSAG00000076564
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Salmo salar
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Also known as: zadh1
Orthologs: human zebrafish all
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Genomic context

Location:: chromosome: ssa01

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
102	current	Ssal_v3.1 (GCF_905237065.1)	ssa01	NC_059442.1 (42497732..42507331, complement)
100	previous assembly	ICSASG_v2 (GCF_000233375.1)	ssa01	NC_027300.1 (39545564..39555129, complement)

Chromosome ssa01 - NC_059442.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables 15-oxoprostaglandin 13-oxidase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in prostaglandin metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: prostaglandin reductase 2

Names: Zinc-binding alcohol dehydrogenase domain-containing protein 1

NP_001134279.1

EC 1.3.1.48

XP_014049530.1

EC 1.3.1.48

XP_045572775.1

EC 1.3.1.48

XP_045572812.1

EC 1.3.1.48

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001140807.1 → NP_001134279.1 prostaglandin reductase 2

See identical proteins and their annotated locations for NP_001134279.1

Status: PROVISIONAL

Source sequence(s)

BT047099

UniProtKB/TrEMBL

B5X7T0

Related

ENSSSAP00000106260.2, ENSSSAT00000140986.2

Conserved Domains (2) summary

cd08293
Location:4 → 346

PTGR2; Prostaglandin reductase

COG2130
Location:4 → 348

CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]

RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

NC_059442.1 Reference Ssal_v3.1

Range

42497732..42507331 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_014194055.2 → XP_014049530.1 prostaglandin reductase 2 isoform X1

UniProtKB/TrEMBL

A0A1S3RAZ8

Related

ENSSSAP00000106270.2, ENSSSAT00000140996.2

Conserved Domains (2) summary

cd08293
Location:3 → 335

PTGR2; Prostaglandin reductase

COG2130
Location:7 → 337

CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
XM_045716819.1 → XP_045572775.1 prostaglandin reductase 2 isoform X2

Related

ENSSSAP00000106280.1, ENSSSAT00000141011.2
XM_045716856.1 → XP_045572812.1 prostaglandin reductase 2 isoform X3