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SLC25A12 solute carrier family 25 member 12 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100172446, updated on 6-Jun-2024

Summary

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Gene symbol
SLC25A12
Gene description
solute carrier family 25 member 12
Locus tag
CR201_G0017089
See related
Ensembl:ENSPPYG00000012931
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Also known as
ARALAR1
Orthologs
human mouse all
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Genomic context

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See SLC25A12 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 11 NC_071996.2 (74371334..74602589, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 2B NC_071987.1 (71768361..71883779, complement)

Chromosome 11 - NC_071996.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL21-like Neighboring gene dynein cytoplasmic 1 intermediate chain 2 Neighboring gene U6 spliceosomal RNA Neighboring gene histone acetyltransferase 1 Neighboring gene methionyl aminopeptidase type 1D, mitochondrial Neighboring gene distal-less homeobox 1 Neighboring gene distal-less homeobox 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp468M1513

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-glutamate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in aspartate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate-aspartate shuttle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial
Names
Calcium-binding mitochondrial carrier protein Aralar1
mitochondrial aspartate glutamate carrier 1
solute carrier family 25 (mitochondrial carrier, Aralar), member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001132062.1 → NP_001125534.1  electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial

    See identical proteins and their annotated locations for NP_001125534.1

    Status: PROVISIONAL

    Source sequence(s)
    CR858723
    UniProtKB/Swiss-Prot
    Q5RBC8
    UniProtKB/TrEMBL
    A0A2J8VQV4, A0A663DEN9, H2P7T8
    Related
    ENSPPYP00000014435.2, ENSPPYT00000015021.3
    Conserved Domains (3) summary
    PTZ00169
    Location:330 → 603
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:514 → 609
    Mito_carr; Mitochondrial carrier protein
    pfam13499
    Location:16 → 80
    EF-hand_7; EF-hand domain pair

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071996.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    74371334..74602589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063712448.1 → XP_063568518.1  electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2J8VQV4, A0A663DEN9, H2P7T8

  2. XM_063712449.1 → XP_063568519.1  electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2J8VQV4, A0A663DEN9, H2P7T8

  3. XM_054548619.2 → XP_054404594.2  electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2J8VQV4, A0A663DEN9, H2P7T8
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5RBC8.1 GenPept UniProtKB/Swiss-Prot:Q5RBC8

Gene LinkOut

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