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LOC100161663 tropomyosin-like [ Acyrthosiphon pisum (pea aphid) ]

Gene ID: 100161663, updated on 10-May-2024

Summary

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Gene symbol
LOC100161663
Gene description
tropomyosin-like
See related
EnsemblRapid:LOC100161663
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Acyrthosiphon pisum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: A1
Exon count:
16
Annotation release Status Assembly Chr Location
103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A1 NC_042494.1 (73619613..73660427, complement)
102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003383542.1 (470465..511255, complement)

Chromosome A1 - NC_042494.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100569062 Neighboring gene tropomyosin-1 Neighboring gene protein regulator of cytokinesis 1 Neighboring gene uncharacterized LOC100163726 Neighboring gene myosin 9 Neighboring gene microsomal glutathione S-transferase 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Tropomyosin-like; uncharacterized protein LOC100161663

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246093.2 → NP_001233022.1  Tropomyosin-like

    See identical proteins and their annotated locations for NP_001233022.1

    Status: PROVISIONAL

    Source sequence(s)
    AK340775
    UniProtKB/TrEMBL
    C4WTU7
    Related
    NP_001233022.1, NM_001246093.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin; Tropomyosin

RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

Genomic

  1. NC_042494.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Range
    73619613..73660427 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008180391.3 → XP_008178613.1  uncharacterized protein LOC100161663 isoform X11

    UniProtKB/TrEMBL
    A0A8R1WY62
    Related
    XP_008178613.1, XM_008180391.3
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 402
    Tropomyosin

  2. XM_008180390.3 → XP_008178612.1  uncharacterized protein LOC100161663 isoform X10

    UniProtKB/TrEMBL
    A0A8R1X0F8
    Related
    XP_008178612.1, XM_008180390.3
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 402
    Tropomyosin

  3. XM_008180388.3 → XP_008178610.1  uncharacterized protein LOC100161663 isoform X8

    UniProtKB/TrEMBL
    A0A8R1X0F9
    Related
    XP_008178610.1, XM_008180388.3
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 402
    Tropomyosin

  4. XM_008180389.3 → XP_008178611.1  uncharacterized protein LOC100161663 isoform X9

    UniProtKB/TrEMBL
    A0A8R1X0C9
    Related
    XP_008178611.1, XM_008180389.3
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 408
    Tropomyosin

  5. XM_008180387.1 → XP_008178609.1  uncharacterized protein LOC100161663 isoform X7

    UniProtKB/TrEMBL
    A0A8R1X0P1
    Related
    XP_008178609.1, XM_008180387.1
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 408
    Tropomyosin

  6. XM_008180396.2 → XP_008178618.1  uncharacterized protein LOC100161663 isoform X18

    UniProtKB/TrEMBL
    A0A8R2AYU7
    Related
    XP_008178618.1, XM_008180396.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  7. XM_008180394.3 → XP_008178616.1  uncharacterized protein LOC100161663 isoform X14

    UniProtKB/TrEMBL
    A0A8R1WXY9
    Related
    XP_008178616.1, XM_008180394.3
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  8. XM_008180393.2 → XP_008178615.1  uncharacterized protein LOC100161663 isoform X13

    UniProtKB/TrEMBL
    A0A8R1WXR9
    Related
    XP_008178615.1, XM_008180393.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  9. XM_008180386.3 → XP_008178608.1  uncharacterized protein LOC100161663 isoform X3

    UniProtKB/TrEMBL
    A0A8R1X2S8
    Related
    XP_008178608.1, XM_008180386.3
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 407
    Tropomyosin

  10. XM_016800883.2 → XP_016656372.1  uncharacterized protein LOC100161663 isoform X19

    UniProtKB/TrEMBL
    A0A8R2D1C0
    Related
    XP_016656372.1, XM_016800883.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  11. XM_016800881.2 → XP_016656370.1  uncharacterized protein LOC100161663 isoform X15

    UniProtKB/TrEMBL
    A0A8R2D1J2
    Related
    XP_016656370.1, XM_016800881.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  12. XM_016800882.2 → XP_016656371.1  uncharacterized protein LOC100161663 isoform X17

    UniProtKB/TrEMBL
    A0A8R2D2C8
    Related
    XP_016656371.1, XM_016800882.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  13. XM_016800880.2 → XP_016656369.1  uncharacterized protein LOC100161663 isoform X12

    UniProtKB/TrEMBL
    A0A8R2D195
    Related
    XP_016656369.1, XM_016800880.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  14. XM_016800878.2 → XP_016656367.1  uncharacterized protein LOC100161663 isoform X5

    UniProtKB/TrEMBL
    A0A8R2H6N2
    Related
    XP_016656367.1, XM_016800878.2
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 407
    Tropomyosin

  15. XM_016800879.2 → XP_016656368.1  uncharacterized protein LOC100161663 isoform X6

    UniProtKB/TrEMBL
    A0A8R2D1P0
    Related
    XP_016656368.1, XM_016800879.2
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 407
    Tropomyosin

  16. XM_016800877.2 → XP_016656366.1  uncharacterized protein LOC100161663 isoform X4

    UniProtKB/TrEMBL
    A0A8R2H565
    Related
    XP_016656366.1, XM_016800877.2
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 407
    Tropomyosin

  17. XM_016800875.2 → XP_016656364.1  uncharacterized protein LOC100161663 isoform X2

    UniProtKB/TrEMBL
    A0A8R2H5G3
    Related
    XP_016656364.1, XM_016800875.2
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 407
    Tropomyosin

  18. XM_008180385.3 → XP_008178607.1  uncharacterized protein LOC100161663 isoform X1

    UniProtKB/TrEMBL
    A0A8R2B3E2
    Related
    XP_008178607.1, XM_008180385.3
    Conserved Domains (1) summary
    pfam00261
    Location:206 → 407
    Tropomyosin

  19. XM_008180395.3 → XP_008178617.1  uncharacterized protein LOC100161663 isoform X16

    UniProtKB/TrEMBL
    A0A8R1WY84
    Related
    XP_008178617.1, XM_008180395.3
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

  20. XM_016800885.2 → XP_016656374.1  uncharacterized protein LOC100161663 isoform X20

    UniProtKB/TrEMBL
    A0A8R2D182
    Related
    XP_016656374.1, XM_016800885.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 281
    Tropomyosin

RNA

  1. XR_510290.3 RNA Sequence

    Related
    XR_510290.3

  2. XR_510281.3 RNA Sequence

    Related
    XR_510281.3

  3. XR_003838841.1 RNA Sequence

    Related
    XR_003838841.1
Nucleotide Protein
Heading Accession and Version

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