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AKIRIN1 akirin 1 [ Ovis aries (sheep) ]

Gene ID: 100158234, updated on 8-Mar-2024

Summary

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Gene symbol
AKIRIN1
Gene description
akirin 1
See related
EnsemblRapid:ENSOARG00020017964
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 1 NC_056054.1 (13713371..13725229)

Chromosome 1 - NC_056054.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene probable ribosome biogenesis protein RLP24 Neighboring gene rho-related GTP-binding protein RhoG-like Neighboring gene uncharacterized LOC114114099 Neighboring gene NADH:ubiquinone oxidoreductase subunit S5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056054.1 Chromosome 1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in myoblast migration involved in skeletal muscle regeneration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of skeletal muscle satellite cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of lamellipodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of macrophage chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
akirin-1
Names
mighty

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001127672.1 → NP_001121144.1  akirin-1

    See identical proteins and their annotated locations for NP_001121144.1

    Status: PROVISIONAL

    Source sequence(s)
    EU650274
    UniProtKB/TrEMBL
    A0A6P3CWY2, B2ZEZ7
    Related
    ENSOARP00020023030.1, ENSOART00020027778.2
    Conserved Domains (1) summary
    PRK14954
    Location:14 → 116
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional

RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056054.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    13713371..13725229
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060415678.1 → XP_060271661.1  akirin-1 isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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