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TBC1D32 TBC1 domain family member 32 [ Sus scrofa (pig) ]

Gene ID: 100156680, updated on 17-Aug-2024

Summary

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Official Symbol
TBC1D32provided by VGNC
Official Full Name
TBC1 domain family member 32provided by VGNC
Primary source
VGNC:VGNC:93777
See related
Ensembl:ENSSSCG00000004242
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in ovary (RPKM 3.5), kidney (RPKM 1.2) and 7 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
40
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 1 NC_010443.5 (41057782..41265416)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 1 NC_010443.4 (45614754..45822509)

Chromosome 1 - NC_010443.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102158650 Neighboring gene cytochrome c oxidase subunit 7C, mitochondrial pseudogene Neighboring gene gap junction protein alpha 1 Neighboring gene uncharacterized LOC106507559 Neighboring gene uncharacterized LOC106506546

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein broad-minded

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010443.5 Reference Sscrofa11.1 Primary Assembly

    Range
    41057782..41265416
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013988502.2 → XP_013843956.2  protein broad-minded isoform X2

    UniProtKB/TrEMBL
    A0A8D0UD56
    Conserved Domains (1) summary
    pfam14961
    Location:12 → 1262
    BROMI; Broad-minded protein

  2. XM_001926894.5 → XP_001926929.2  protein broad-minded isoform X1

    UniProtKB/TrEMBL
    A0A480JCE6, A0A8D1FF36, A0A8D1GH69, F1SF42
    Related
    ENSSSCP00000004581.4, ENSSSCT00000004689.5
    Conserved Domains (1) summary
    pfam14961
    Location:12 → 1297
    BROMI; Broad-minded protein

  3. XM_021088926.1 → XP_020944585.1  protein broad-minded isoform X3

    UniProtKB/TrEMBL
    A0A8D1FF36
    Conserved Domains (1) summary
    pfam14961
    Location:1 → 1188
    BROMI; Broad-minded protein

  4. XM_021088930.1 → XP_020944589.1  protein broad-minded isoform X4

    UniProtKB/TrEMBL
    A0A8D1FF36
    Conserved Domains (1) summary
    pfam14961
    Location:14 → 1122
    BROMI; Broad-minded protein

  5. XM_021088940.1 → XP_020944599.1  protein broad-minded isoform X5

    UniProtKB/TrEMBL
    A0A8D1FF36
    Conserved Domains (1) summary
    pfam14961
    Location:1 → 1050
    BROMI; Broad-minded protein

  6. XM_021088942.1 → XP_020944601.1  protein broad-minded isoform X5

    UniProtKB/TrEMBL
    A0A8D1FF36
    Conserved Domains (1) summary
    pfam14961
    Location:1 → 1050
    BROMI; Broad-minded protein

RNA

  1. XR_002343100.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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