SLC25A25 solute carrier family 25 member 25 [Sus scrofa (pig)] - Gene

Summary

Official Symbol: SLC25A25provided by VGNC
Official Full Name: solute carrier family 25 member 25provided by VGNC
Primary source: VGNC:VGNC:93002
See related: Ensembl:ENSSSCG00000005636
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Ubiquitous expression in liver (RPKM 22.9), psoas major muscle (RPKM 21.4) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	1	NC_010443.5 (268531752..268575195)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	1	NC_010443.4 (302453222..302453476) , (302558673..302565658)

Chromosome 1 - NC_010443.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

ksks11 (e-PCR)
- UniSTS:514132

MARC_5233-5234:996690163:3 (e-PCR)
- UniSTS:269468

MARC_14597-14598:1009821193:1 (e-PCR)
- UniSTS:267715

MARC_17155-17156:1021053900:3 (e-PCR)
- UniSTS:268235

ksks62 (e-PCR)
- UniSTS:514528

MARC_13577-13578:1000754006:1 (e-PCR)
- UniSTS:267511

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed
enables calcium ion binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: mitochondrial adenyl nucleotide antiporter SLC25A25

Names: solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001164510.1 → NP_001157982.1 mitochondrial adenyl nucleotide antiporter SLC25A25

See identical proteins and their annotated locations for NP_001157982.1

Status: PROVISIONAL

Source sequence(s)

GQ368239

UniProtKB/TrEMBL

A0A4X1U630, A0A8D2A914, C8C417, F1RRY3

Related

ENSSSCP00000077707.1, ENSSSCT00000101162.1

Conserved Domains (3) summary

cd00051
Location:114 → 173

EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

pfam00153
Location:308 → 400

Mito_carr; Mitochondrial carrier protein

pfam13499
Location:51 → 108

EF-hand_7; EF-hand domain pair