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SERPINA5 serpin family A member 5 [ Sus scrofa (pig) ]

Gene ID: 100153513, updated on 17-Aug-2024

Summary

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Official Symbol
SERPINA5provided by VGNC
Official Full Name
serpin family A member 5provided by VGNC
Primary source
VGNC:VGNC:92734
See related
Ensembl:ENSSSCG00000002481
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in liver (RPKM 624.5) and mixtures (RPKM 203.6) See more
Orthologs
human all
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Genomic context

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Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 7 NC_010449.5 (115799414..115810825)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 7 NC_010449.4 (122916002..122927421)

Chromosome 7 - NC_010449.5Genomic Context describing neighboring genes Neighboring gene serpin A12 Neighboring gene kallistatin Neighboring gene serpin A3-8 Neighboring gene serpin A3-8 Neighboring gene serpin A3-5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma serine protease inhibitor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010449.5 Reference Sscrofa11.1 Primary Assembly

    Range
    115799414..115810825
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001928569.5 → XP_001928604.1  plasma serine protease inhibitor

    See identical proteins and their annotated locations for XP_001928604.1

    UniProtKB/TrEMBL
    A0A480P2B4, A0A4X1SGC6, A0A8D0Y9U8, A0A8D1PGP9
    Conserved Domains (1) summary
    cd02056
    Location:46 → 405
    alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...

  2. XM_005666421.3 → XP_005666478.1  plasma serine protease inhibitor

    See identical proteins and their annotated locations for XP_005666478.1

    UniProtKB/TrEMBL
    A0A480P2B4, A0A4X1SGC6, A0A8D0Y9U8, A0A8D1PGP9
    Conserved Domains (1) summary
    cd02056
    Location:46 → 405
    alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...

  3. XM_005666420.3 → XP_005666477.1  plasma serine protease inhibitor

    See identical proteins and their annotated locations for XP_005666477.1

    UniProtKB/TrEMBL
    A0A480P2B4, A0A4X1SGC6, A0A8D0Y9U8, A0A8D1PGP9
    Related
    ENSSSCP00000040778.1, ENSSSCT00000038760.2
    Conserved Domains (1) summary
    cd02056
    Location:46 → 405
    alpha-1-antitrypsin_like; alpha-1-antitrypsin_like. This family contains a variety of different members of clade A of the serpin superfamily. They include the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, ...
Nucleotide Protein
Heading Accession and Version

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