U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

DNPEP aspartyl aminopeptidase [ Sus scrofa (pig) ]

Gene ID: 100153171, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
DNPEPprovided by VGNC
Official Full Name
aspartyl aminopeptidaseprovided by VGNC
Primary source
VGNC:VGNC:96230
See related
Ensembl:ENSSSCG00000016220
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 28.5), kidney (RPKM 18.8) and 8 other tissues See more
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See DNPEP in Genome Data Viewer
Location:
chromosome: 15
Exon count:
16
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 15 NC_010457.5 (121391746..121404138, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 15 NC_010457.4 (134425137..134437835, complement)

Chromosome 15 - NC_010457.5Genomic Context describing neighboring genes Neighboring gene mitochondrial fission factor-like Neighboring gene regulated endocrine specific protein 18 Neighboring gene microRNA mir-4334 Neighboring gene desmin Neighboring gene striated muscle enriched protein kinase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Comparative analysis of protein coding sequences from human, mouse and the domesticated pig. Jørgensen FG, et al. BMC Biol, 2005 Jan 28. PMID 15679890, Free PMC Article
  2. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  3. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
aspartyl aminopeptidase
NP_001172115.1
XP_020930182.1
XP_020930183.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001185186.1 → NP_001172115.1  aspartyl aminopeptidase

    Status: PROVISIONAL

    Source sequence(s)
    AK235617
    UniProtKB/TrEMBL
    A0A480KKD6, A0A481C2C5
    Related
    ENSSSCP00000050275.2, ENSSSCT00000057132.2
    Conserved Domains (1) summary
    cd05658
    Location:18 → 463
    M18_DAP; M18 Peptidase Aspartyl aminopeptidase

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010457.5 Reference Sscrofa11.1 Primary Assembly

    Range
    121391746..121404138 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021074523.1 → XP_020930182.1  aspartyl aminopeptidase isoform X1

    UniProtKB/TrEMBL
    A0A480RMJ8, A0A481D8J3, A0A4X1UA41
    Conserved Domains (1) summary
    cd05658
    Location:14 → 459
    M18_DAP; M18 Peptidase Aspartyl aminopeptidase

  2. XM_021074524.1 → XP_020930183.1  aspartyl aminopeptidase isoform X1

    UniProtKB/TrEMBL
    A0A480RMJ8, A0A481D8J3, A0A4X1UA41
    Related
    ENSSSCP00000044799.1, ENSSSCT00000038344.2
    Conserved Domains (1) summary
    cd05658
    Location:14 → 459
    M18_DAP; M18 Peptidase Aspartyl aminopeptidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials