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SLC39A6 solute carrier family 39 member 6 [ Equus caballus (horse) ]

Gene ID: 100147463, updated on 17-Aug-2024

Summary

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Official Symbol
SLC39A6provided by VGNC
Official Full Name
solute carrier family 39 member 6provided by VGNC
Primary source
VGNC:VGNC:23206
See related
Ensembl:ENSECAG00000008456
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 8 NC_009151.3 (59683079..59702445, complement)

Chromosome 8 - NC_009151.3Genomic Context describing neighboring genes Neighboring gene regulation of nuclear pre-mRNA domain containing 1A Neighboring gene uncharacterized LOC111774849 Neighboring gene elongator acetyltransferase complex subunit 2 Neighboring gene molybdenum cofactor sulfurase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009151.3 Chromosome 8 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic cation:bicarbonate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular monoatomic cation homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc transporter ZIP6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009151.3 Reference EquCab3.0 Primary Assembly

    Range
    59683079..59702445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023647670.1 → XP_023503438.1  zinc transporter ZIP6

    UniProtKB/TrEMBL
    F6W4B0
    Related
    ENSECAP00000006536.2, ENSECAT00000008693.3
    Conserved Domains (1) summary
    pfam02535
    Location:303 → 722
    Zip; ZIP Zinc transporter
Nucleotide Protein
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