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FOXR1 forkhead box R1 [ Equus caballus (horse) ]

Gene ID: 100147225, updated on 8-Mar-2024

Summary

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Official Symbol
FOXR1provided by VGNC
Official Full Name
forkhead box R1provided by VGNC
Primary source
VGNC:VGNC:18117
See related
Ensembl:ENSECAG00000016285
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See FOXR1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (27346974..27356355)
102 previous assembly EquCab2.0 (GCF_000002305.2) 7 NC_009150.2 (26700262..26709125)

Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111774229 Neighboring gene uroplakin 2 Neighboring gene centrosomal AT-AC splicing factor Neighboring gene ribosomal protein S25 Neighboring gene trafficking protein particle complex subunit 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein R1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009150.3 Reference EquCab3.0 Primary Assembly

    Range
    27346974..27356355
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023644179.1 → XP_023499947.1  forkhead box protein R1

    UniProtKB/TrEMBL
    F6TNV7
    Related
    ENSECAP00000013869.3, ENSECAT00000017112.4
    Conserved Domains (1) summary
    pfam00250
    Location:174 → 262
    Forkhead; Forkhead domain

RNA

  1. XR_002808953.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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