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cenpe centromere protein E [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100126678, updated on 17-Aug-2024

Summary

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Official Symbol
cenpeprovided by Xenbase
Official Full Name
centromere protein Eprovided by Xenbase
Primary source
Xenbase:XB-GENE-952286
See related
Ensembl:ENSXETG00000021319
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
kif10; cenp-E; XCENP-E
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
53
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (73427885..73470366)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (64036273..64079718)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene exosome complex component MTR3 pseudogene Neighboring gene tachykinin receptor 3 Neighboring gene 3-hydroxybutyrate dehydrogenase 2 Neighboring gene solute carrier family 9 member B2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
  
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within microtubule-based movement IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
centromere-associated protein E
Names
centromere protein E, 312kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    73427885..73470366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004911090.4 → XP_004911147.2  centromere-associated protein E

    UniProtKB/TrEMBL
    A0A6I8RXX0, F6TSH1
    Related
    ENSXETP00000085427.2, ENSXETT00000086828.2
    Conserved Domains (3) summary
    COG1196
    Location:1905 → 2671
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:551 → 1422
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    cd01374
    Location:6 → 330
    KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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