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TRAPPC8 trafficking protein particle complex subunit 8 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100084851, updated on 30-Apr-2024

Summary

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Gene symbol
TRAPPC8
Gene description
trafficking protein particle complex subunit 8
See related
Ensembl:ENSOANG00000005617
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
30
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 7 NC_041734.1 (15858096..15927654)

Chromosome 7 - NC_041734.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 125 Neighboring gene uncharacterized LOC114813241 Neighboring gene uncharacterized LOC114813180 Neighboring gene beta-1,4-galactosyltransferase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041734.1 Chromosome 7 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TRAPPIII protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trafficking protein particle complex subunit 8
Names
trafficking protein particle complex 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041734.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    15858096..15927654
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029068767.2 → XP_028924600.1  trafficking protein particle complex subunit 8 isoform X3

    Conserved Domains (1) summary
    pfam12739
    Location:185 → 633
    TRAPPC-Trs85; ER-Golgi trafficking TRAPP I complex 85 kDa subunit

  2. XM_029068764.2 → XP_028924597.1  trafficking protein particle complex subunit 8 isoform X1

    UniProtKB/TrEMBL
    A0A6I8PG90
    Related
    ENSOANP00000051692.1
    Conserved Domains (1) summary
    pfam12739
    Location:185 → 633
    TRAPPC-Trs85; ER-Golgi trafficking TRAPP I complex 85 kDa subunit

  3. XM_029068766.2 → XP_028924599.1  trafficking protein particle complex subunit 8 isoform X2

    UniProtKB/TrEMBL
    F7B985
    Related
    ENSOANP00000008941.3
    Conserved Domains (1) summary
    pfam12739
    Location:157 → 605
    TRAPPC-Trs85; ER-Golgi trafficking TRAPP I complex 85 kDa subunit
Nucleotide Protein
Heading Accession and Version

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