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TNPO1 transportin 1 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100082217, updated on 30-Apr-2024

Summary

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Gene symbol
TNPO1
Gene description
transportin 1
See related
Ensembl:ENSOANG00000015785
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
26
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 1 NC_041728.1 (22403692..22482786)

Chromosome 1 - NC_041728.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA7 Neighboring gene histone H2B-like Neighboring gene uncharacterized LOC120638302 Neighboring gene FCH and mu domain containing endocytic adaptor 2 Neighboring gene uncharacterized LOC120638243

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041728.1 Chromosome 1 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transportin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041728.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    22403692..22482786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029076308.2 → XP_028932141.1  transportin-1 isoform X3

    Conserved Domains (2) summary
    COG5215
    Location:32 → 767
    KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
    sd00044
    Location:103 → 124
    HEAT; HEAT repeat [structural motif]

  2. XM_029076306.2 → XP_028932139.1  transportin-1 isoform X2

    Conserved Domains (2) summary
    COG5215
    Location:32 → 767
    KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
    sd00044
    Location:103 → 124
    HEAT; HEAT repeat [structural motif]

  3. XM_029076304.2 → XP_028932137.1  transportin-1 isoform X1

    UniProtKB/TrEMBL
    F7FXJ5
    Related
    ENSOANP00000024890.4
    Conserved Domains (2) summary
    COG5215
    Location:32 → 767
    KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]
    sd00044
    Location:103 → 124
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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