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CLDN10 claudin 10 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100081714, updated on 30-Apr-2024

Summary

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Gene symbol
CLDN10
Gene description
claudin 10
See related
Ensembl:ENSOANG00000042413
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 10 NC_041737.1 (19794970..19938859, complement)

Chromosome 10 - NC_041737.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA7 Neighboring gene vegetative cell wall protein gp1-like Neighboring gene DAZ interacting zinc finger protein 1 Neighboring gene ATP binding cassette subfamily C member 4 (PEL blood group) Neighboring gene SRY-box transcription factor 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041737.1 Chromosome 10 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041737.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    19794970..19938859 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029073371.2 → XP_028929204.1  claudin-10 isoform X7

    UniProtKB/TrEMBL
    A0A6I8PC88
    Conserved Domains (1) summary
    cl21598
    Location:24 → 131
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_029073372.2 → XP_028929205.1  claudin-10 isoform X7

    UniProtKB/TrEMBL
    A0A6I8PC88
    Related
    ENSOANP00000051485.1
    Conserved Domains (1) summary
    cl21598
    Location:24 → 131
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  3. XM_029073369.1 → XP_028929202.1  claudin-10 isoform X5

    Conserved Domains (1) summary
    cl21598
    Location:9 → 158
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  4. XM_029073363.1 → XP_028929196.1  claudin-10 isoform X1

    UniProtKB/TrEMBL
    A0A6I8PK12
    Conserved Domains (1) summary
    cl21598
    Location:9 → 177
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  5. XM_029073364.1 → XP_028929197.1  claudin-10 isoform X2

    UniProtKB/TrEMBL
    A0A6I8PK12
    Related
    ENSOANP00000052717.1, ENSOANT00000062078.1
    Conserved Domains (1) summary
    cl21598
    Location:9 → 177
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  6. XM_029073370.1 → XP_028929203.1  claudin-10 isoform X6

    Conserved Domains (1) summary
    cl21598
    Location:4 → 160
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  7. XM_029073365.1 → XP_028929198.1  claudin-10 isoform X3

    Conserved Domains (1) summary
    pfam00822
    Location:4 → 179
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  8. XM_029073368.2 → XP_028929201.1  claudin-10 isoform X4

    UniProtKB/TrEMBL
    A0A6I8PD28
    Related
    ENSOANP00000050676.1
    Conserved Domains (1) summary
    pfam00822
    Location:4 → 179
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
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