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STX7 syntaxin 7 [ Equus caballus (horse) ]

Gene ID: 100073104, updated on 17-Aug-2024

Summary

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Official Symbol
STX7provided by VGNC
Official Full Name
syntaxin 7provided by VGNC
Primary source
VGNC:VGNC:23734
See related
Ensembl:ENSECAG00000019923
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (79761397..79810003, complement)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111775504 Neighboring gene monooxygenase DBH like 1 Neighboring gene trace amine-associated receptor 5-like Neighboring gene trace amine-associated receptor 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-7
Names
syntaxin-7-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    79761397..79810003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023651104.1 → XP_023506872.1  syntaxin-7 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2I2V7
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  2. XM_023651103.1 → XP_023506871.1  syntaxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A9L0TGK0
    Related
    ENSECAP00000037795.2, ENSECAT00000060738.3
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  3. XM_014734984.2 → XP_014590470.1  syntaxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A9L0TNU3
    Conserved Domains (2) summary
    cd15875
    Location:162 → 221
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:24 → 113
    Syntaxin_2; Syntaxin-like protein
Nucleotide Protein
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