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ALLC allantoicase [ Equus caballus (horse) ]

Gene ID: 100072815, updated on 8-Mar-2024

Summary

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Official Symbol
ALLCprovided by VGNC
Official Full Name
allantoicaseprovided by VGNC
Primary source
VGNC:VGNC:15260
See related
Ensembl:ENSECAG00000014068
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ALLC in Genome Data Viewer
Location:
chromosome: 15
Exon count:
15
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (89782427..89819366, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 15 NC_009158.2 (88505621..88542550, complement)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111768239 Neighboring gene doublecortin domain containing 2C Neighboring gene uncharacterized LOC111768171 Neighboring gene collectin subfamily member 11 Neighboring gene ribosomal protein S7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables allantoicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in allantoin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable allantoicase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    89782427..89819366 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005600233.3 → XP_005600290.1  probable allantoicase

    See identical proteins and their annotated locations for XP_005600290.1

    UniProtKB/TrEMBL
    F7AJG7
    Conserved Domains (1) summary
    TIGR02961
    Location:18 → 385
    allantoicase; allantoicase

  2. XM_001502861.5 → XP_001502911.2  probable allantoicase

    See identical proteins and their annotated locations for XP_001502911.2

    UniProtKB/TrEMBL
    F7AJG7
    Conserved Domains (1) summary
    TIGR02961
    Location:18 → 385
    allantoicase; allantoicase

  3. XM_023619610.1 → XP_023475378.1  probable allantoicase

    UniProtKB/TrEMBL
    F7AJG7
    Conserved Domains (1) summary
    TIGR02961
    Location:18 → 385
    allantoicase; allantoicase

  4. XM_023619612.1 → XP_023475380.1  probable allantoicase

    UniProtKB/TrEMBL
    F7AJG7
    Conserved Domains (1) summary
    TIGR02961
    Location:18 → 385
    allantoicase; allantoicase

  5. XM_023619611.1 → XP_023475379.1  probable allantoicase

    UniProtKB/TrEMBL
    F7AJG7
    Related
    ENSECAP00000011885.1, ENSECAT00000014848.4
    Conserved Domains (1) summary
    TIGR02961
    Location:18 → 385
    allantoicase; allantoicase

  6. XM_023619613.1 → XP_023475381.1  probable allantoicase

    UniProtKB/TrEMBL
    F7AJG7
    Conserved Domains (1) summary
    TIGR02961
    Location:18 → 385
    allantoicase; allantoicase
Nucleotide Protein
Heading Accession and Version

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