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SH2D5 SH2 domain containing 5 [ Equus caballus (horse) ]

Gene ID: 100071771, updated on 8-Mar-2024

Summary

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Official Symbol
SH2D5provided by VGNC
Official Full Name
SH2 domain containing 5provided by VGNC
Primary source
VGNC:VGNC:49415
See related
Ensembl:ENSECAG00000013721
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See SH2D5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (33717012..33729320)
102 previous assembly EquCab2.0 (GCF_000002305.2) 2 NC_009145.2 (33555898..33564759)

Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4 gamma 3 Neighboring gene U6 spliceosomal RNA Neighboring gene heterochromatin protein 1 binding protein 3 Neighboring gene kinesin family member 17 Neighboring gene uncharacterized LOC102148467 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH2 domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009145.3 Reference EquCab3.0 Primary Assembly

    Range
    33717012..33729320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023635582.1 → XP_023491350.1  SH2 domain-containing protein 5 isoform X3

    UniProtKB/TrEMBL
    A0A9L0RXW5, F7BBV0
    Related
    ENSECAP00000011463.3, ENSECAT00000014348.3
    Conserved Domains (2) summary
    cd00173
    Location:302 → 378
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:23 → 151
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

  2. XM_023635580.1 → XP_023491348.1  SH2 domain-containing protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A9L0ST97
    Conserved Domains (2) summary
    cd00173
    Location:336 → 412
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:57 → 185
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

  3. XM_023635581.1 → XP_023491349.1  SH2 domain-containing protein 5 isoform X2

    UniProtKB/TrEMBL
    A0A9L0S7K8, A0A9L0ST97
    Related
    ENSECAP00000070138.1, ENSECAT00000126990.1
    Conserved Domains (2) summary
    cd00173
    Location:335 → 411
    SH2; Src homology 2 (SH2) domain
    cd13157
    Location:57 → 184
    PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

  4. XM_023635583.1 → XP_023491351.1  SH2 domain-containing protein 5 isoform X4

    UniProtKB/TrEMBL
    A0A9L0RXW5
    Conserved Domains (2) summary
    cd00173
    Location:217 → 293
    SH2; Src homology 2 (SH2) domain
    cl17171
    Location:1 → 66
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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