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PLCL1 phospholipase C like 1 (inactive) [ Equus caballus (horse) ]

Gene ID: 100070606, updated on 8-Mar-2024

Summary

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Official Symbol
PLCL1provided by VGNC
Official Full Name
phospholipase C like 1 (inactive)provided by VGNC
Primary source
VGNC:VGNC:56160
See related
Ensembl:ENSECAG00000007274
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PLCL1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
7
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 18 NC_009161.3 (73130922..73441286)
102 previous assembly EquCab2.0 (GCF_000002305.2) 18 NC_009161.2 (73217411..73287126)

Chromosome 18 - NC_009161.3Genomic Context describing neighboring genes Neighboring gene raftlin family member 2 Neighboring gene boule homolog, RNA binding protein Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene methionyl-tRNA synthetase 2, mitochondrial Neighboring gene uncharacterized LOC111768783 Neighboring gene uncharacterized LOC111768845

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inactive phospholipase C-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009161.3 Reference EquCab3.0 Primary Assembly

    Range
    73130922..73441286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023622295.1 → XP_023478063.1  inactive phospholipase C-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F5PQU1, A0A9L0QYU9
    Related
    ENSECAP00000050722.1, ENSECAT00000071019.2
    Conserved Domains (5) summary
    cd00275
    Location:721 → 849
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08597
    Location:399 → 689
    PI-PLCc_PRIP_metazoa; Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein
    cd13364
    Location:116 → 224
    PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
    cd15898
    Location:244 → 273
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:244 → 386
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes

  2. XM_023622296.1 → XP_023478064.1  inactive phospholipase C-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A5F5PGN1
    Related
    ENSECAP00000047628.2, ENSECAT00000065806.2
    Conserved Domains (5) summary
    cd00275
    Location:622 → 750
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08597
    Location:300 → 590
    PI-PLCc_PRIP_metazoa; Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein
    cd13364
    Location:17 → 125
    PH_PLC_eta; Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain
    cd15898
    Location:145 → 174
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:145 → 287
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
Nucleotide Protein
Heading Accession and Version

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