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B4GALT1 beta-1,4-galactosyltransferase 1 [ Equus caballus (horse) ]

Gene ID: 100068209, updated on 8-Mar-2024

Summary

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Official Symbol
B4GALT1provided by VGNC
Official Full Name
beta-1,4-galactosyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:15739
See related
Ensembl:ENSECAG00000012393
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See B4GALT1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
6
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 23 NC_009166.3 (49383797..49431672, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 23 NC_009166.2 (49572207..49594367, complement)

Chromosome 23 - NC_009166.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106782471 Neighboring gene SMU1 DNA replication regulator and spliceosomal factor Neighboring gene uncharacterized LOC102150060 Neighboring gene 60S ribosomal protein L12 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009166.3 Reference EquCab3.0 Primary Assembly

    Range
    49383797..49431672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023627468.1 → XP_023483236.1  beta-1,4-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A3Q2I5A5
    Related
    ENSECAP00000042457.1, ENSECAT00000049638.3
    Conserved Domains (1) summary
    cd00899
    Location:175 → 393
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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