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ASCC3 activating signal cointegrator 1 complex subunit 3 [ Equus caballus (horse) ]

Gene ID: 100066202, updated on 8-Mar-2024

Summary

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Official Symbol
ASCC3provided by VGNC
Official Full Name
activating signal cointegrator 1 complex subunit 3provided by VGNC
Primary source
VGNC:VGNC:15579
See related
Ensembl:ENSECAG00000012013
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ASCC3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
43
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (52606771..52935618, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 10 NC_009153.2 (51480702..51811660, complement)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111775494 Neighboring gene SIM bHLH transcription factor 1 Neighboring gene receptor of activated protein C kinase 1 pseudogene Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene tigger transposable element-derived protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activating signal cointegrator 1 complex subunit 3
Names
activating signal cointegrator 1 complex subunit 3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    52606771..52935618 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001915668.5 → XP_001915703.3  activating signal cointegrator 1 complex subunit 3 isoform X1

    UniProtKB/TrEMBL
    F6REW3
    Related
    ENSECAP00000010125.3, ENSECAT00000012812.4
    Conserved Domains (3) summary
    smart00611
    Location:1809 → 2178
    SEC63; Domain of unknown function in Sec63p, Brr2p and other proteins
    COG1204
    Location:436 → 1244
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
    cl28231
    Location:1327 → 1904
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]

  2. XM_023650854.1 → XP_023506622.1  activating signal cointegrator 1 complex subunit 3 isoform X2

    UniProtKB/TrEMBL
    A0A9L0SY44
    Conserved Domains (3) summary
    smart00611
    Location:1473 → 1842
    SEC63; Domain of unknown function in Sec63p, Brr2p and other proteins
    COG1204
    Location:100 → 908
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
    cl28231
    Location:991 → 1568
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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