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LARP7 La ribonucleoprotein 7, transcriptional regulator [ Equus caballus (horse) ]

Gene ID: 100064225, updated on 8-Mar-2024

Summary

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Official Symbol
LARP7provided by VGNC
Official Full Name
La ribonucleoprotein 7, transcriptional regulatorprovided by VGNC
Primary source
VGNC:VGNC:19590
See related
Ensembl:ENSECAG00000000834
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See LARP7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (114110463..114129249, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 2 NC_009145.2 (113619089..113638087, complement)

Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene ankyrin 2 Neighboring gene RNA-binding protein 42 pseudogene Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene uncharacterized LOC111772586 Neighboring gene microRNA mir-302b Neighboring gene microRNA mir-302c Neighboring gene microRNA mir-302a Neighboring gene microRNA mir-302d Neighboring gene microRNA mir-367 Neighboring gene zinc finger GRF-type containing 1 Neighboring gene uncharacterized LOC106782852 Neighboring gene neurogenin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
la-related protein 7
Names
La ribonucleoprotein domain family member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009145.3 Reference EquCab3.0 Primary Assembly

    Range
    114110463..114129249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005607885.3 → XP_005607942.1  la-related protein 7 isoform X2

    See identical proteins and their annotated locations for XP_005607942.1

    UniProtKB/TrEMBL
    A0A9L0SGA1
    Conserved Domains (3) summary
    cd08032
    Location:30 → 111
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:126 → 205
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    pfam08777
    Location:453 → 551
    RRM_3; RNA binding motif

  2. XM_001503451.4 → XP_001503501.1  la-related protein 7 isoform X1

    See identical proteins and their annotated locations for XP_001503501.1

    UniProtKB/TrEMBL
    A0A9L0SGA1
    Related
    ENSECAP00000073891.1, ENSECAT00000126597.1
    Conserved Domains (3) summary
    cd08032
    Location:30 → 111
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:126 → 205
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    pfam08777
    Location:454 → 552
    RRM_3; RNA binding motif
Nucleotide Protein
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