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CCDC6 coiled-coil domain containing 6 [ Equus caballus (horse) ]

Gene ID: 100062742, updated on 8-Mar-2024

Summary

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Official Symbol
CCDC6provided by VGNC
Official Full Name
coiled-coil domain containing 6provided by VGNC
Primary source
VGNC:VGNC:16170
See related
Ensembl:ENSECAG00000006268
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CCDC6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (49722417..49829726, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 1 NC_009144.2 (49359458..49467004, complement)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 9 Neighboring gene myoregulin Neighboring gene uncharacterized LOC111769153 Neighboring gene ankyrin 3 Neighboring gene uncharacterized LOC102150134

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    49722417..49829726 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001503415.5 → XP_001503465.1  coiled-coil domain-containing protein 6

    UniProtKB/TrEMBL
    F7B0X3
    Related
    ENSECAP00000004668.2, ENSECAT00000006560.4
    Conserved Domains (3) summary
    cd00187
    Location:98 → 332
    TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...
    pfam09755
    Location:54 → 339
    DUF2046; Uncharacterized conserved protein H4 (DUF2046)
    cl00259
    Location:120 → 209
    Sm_like; Sm and related proteins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials