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KLF15 KLF transcription factor 15 [ Equus caballus (horse) ]

Gene ID: 100060862, updated on 17-Aug-2024

Summary

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Official Symbol
KLF15provided by VGNC
Official Full Name
KLF transcription factor 15provided by VGNC
Primary source
VGNC:VGNC:19443
See related
Ensembl:ENSECAG00000021092
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (281836..359913, complement)

Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene solute carrier family 41 member 3 Neighboring gene aldehyde dehydrogenase 1 family member L1 Neighboring gene uncharacterized LOC111768277 Neighboring gene uncharacterized LOC111768278 Neighboring gene cilia and flagella associated protein 100 Neighboring gene ZXD family zinc finger C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009159.3 Chromosome 16 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 15
Names
Kruppel like factor 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009159.3 Reference EquCab3.0 Primary Assembly

    Range
    281836..359913 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023619838.1 → XP_023475606.1  Krueppel-like factor 15 isoform X2

    UniProtKB/TrEMBL
    A0A9L0S061
    Conserved Domains (3) summary
    sd00017
    Location:319 → 341
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:317 → 341
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:333 → 355
    zf-H2C2_2; Zinc-finger double domain

  2. XM_023619835.1 → XP_023475603.1  Krueppel-like factor 15 isoform X1

    UniProtKB/TrEMBL
    A0A9L0S061, H9H009
    Conserved Domains (3) summary
    COG5189
    Location:302 → 397
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:319 → 341
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21580
    Location:3 → 317
    KLF15_N; N-terminal domain of Kruppel-like factor 15

  3. XM_023619837.1 → XP_023475605.1  Krueppel-like factor 15 isoform X1

    UniProtKB/TrEMBL
    A0A9L0S061, H9H009
    Conserved Domains (3) summary
    COG5189
    Location:302 → 397
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:319 → 341
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21580
    Location:3 → 317
    KLF15_N; N-terminal domain of Kruppel-like factor 15

  4. XM_023619836.1 → XP_023475604.1  Krueppel-like factor 15 isoform X1

    UniProtKB/TrEMBL
    A0A9L0S061, H9H009
    Related
    ENSECAP00000018509.2, ENSECAT00000022396.3
    Conserved Domains (3) summary
    COG5189
    Location:302 → 397
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:319 → 341
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21580
    Location:3 → 317
    KLF15_N; N-terminal domain of Kruppel-like factor 15
Nucleotide Protein
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