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UBXN1 UBX domain protein 1 [ Equus caballus (horse) ]

Gene ID: 100060210, updated on 17-Aug-2024

Summary

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Official Symbol
UBXN1provided by VGNC
Official Full Name
UBX domain protein 1provided by VGNC
Primary source
VGNC:VGNC:24752
See related
Ensembl:ENSECAG00000017404
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 12 NC_009155.3 (26485624..26488360, complement)

Chromosome 12 - NC_009155.3Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA57 Neighboring gene citrate synthase lysine methyltransferase Neighboring gene ubiquinol-cytochrome c reductase complex assembly factor 3 Neighboring gene LRRN4 C-terminal like Neighboring gene BSCL2 lipid droplet biogenesis associated, seipin Neighboring gene G protein subunit gamma 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009155.3 Chromosome 12 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K48-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of protein K48-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009155.3 Reference EquCab3.0 Primary Assembly

    Range
    26485624..26488360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001502760.6 → XP_001502810.1  UBX domain-containing protein 1

    See identical proteins and their annotated locations for XP_001502810.1

    UniProtKB/TrEMBL
    F6S4B7
    Related
    ENSECAP00000015138.2, ENSECAT00000018554.3
    Conserved Domains (2) summary
    cd01772
    Location:208 → 291
    SAKS1_UBX; SAKS1-like UBX domain
    cd14302
    Location:5 → 45
    UBA_UBXN1; UBA domain found in UBX domain-containing protein 1 (UBXN1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials