U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC30A1 solute carrier family 30 member 1 [ Equus caballus (horse) ]

Gene ID: 100054805, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
SLC30A1provided by VGNC
Official Full Name
solute carrier family 30 member 1provided by VGNC
Primary source
VGNC:VGNC:58679
See related
Ensembl:ENSECAG00000003051
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC30A1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (24178719..24186089)
102 previous assembly EquCab2.0 (GCF_000002305.2) 5 NC_009148.2 (26940919..26945837)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene NIMA related kinase 2 Neighboring gene microRNA mir-8972 Neighboring gene RD3 regulator of GUCY2D Neighboring gene putative uncharacterized protein encoded by LINC00467

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in detoxification of zinc ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular zinc ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zinc ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc transporter 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    24178719..24186089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023640758.1 → XP_023496526.1  zinc transporter 1

    UniProtKB/TrEMBL
    F7DUJ0
    Related
    ENSECAP00000002068.2, ENSECAT00000002890.4
    Conserved Domains (1) summary
    COG1230
    Location:6 → 421
    CzcD; Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.