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CTDSPL CTD small phosphatase like [ Equus caballus (horse) ]

Gene ID: 100054279, updated on 8-Mar-2024

Summary

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Official Symbol
CTDSPLprovided by VGNC
Official Full Name
CTD small phosphatase likeprovided by VGNC
Primary source
VGNC:VGNC:49329
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CTDSPL in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (48835858..48947420, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 16 NC_009159.2 (47227596..47262020, complement)

Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene phospholipase C delta 1 Neighboring gene villin like Neighboring gene microRNA mir-26a-2 Neighboring gene integrin subunit alpha 9 Neighboring gene uncharacterized LOC111768381 Neighboring gene APRG1 tumor suppressor candidate

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II CTD heptapeptide repeat phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CTD small phosphatase-like protein
Names
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009159.3 Reference EquCab3.0 Primary Assembly

    Range
    48835858..48947420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023620743.1 → XP_023476511.1  CTD small phosphatase-like protein isoform X2

    Conserved Domains (1) summary
    TIGR02251
    Location:95 → 254
    HIF-SF_euk; Dullard-like phosphatase domain

  2. XM_023620742.1 → XP_023476510.1  CTD small phosphatase-like protein isoform X1

    Conserved Domains (1) summary
    TIGR02251
    Location:106 → 265
    HIF-SF_euk; Dullard-like phosphatase domain
Nucleotide Protein
Heading Accession and Version

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