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GP2 glycoprotein 2 [ Equus caballus (horse) ]

Gene ID: 100051807, updated on 8-Mar-2024

Summary

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Official Symbol
GP2provided by VGNC
Official Full Name
glycoprotein 2provided by VGNC
Primary source
VGNC:VGNC:18467
See related
Ensembl:ENSECAG00000016956
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GP2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (28140709..28156873)
102 previous assembly EquCab2.0 (GCF_000002305.2) 13 NC_009156.2 (27027103..27043266)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene uromodulin Neighboring gene uncharacterized LOC111767543 Neighboring gene G protein-coupled receptor 139

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in neutrophil migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pancreatic secretory granule membrane major glycoprotein GP2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    28140709..28156873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014730090.2 → XP_014585576.1  pancreatic secretory granule membrane major glycoprotein GP2

    UniProtKB/TrEMBL
    F6WVV0
    Related
    ENSECAP00000014806.3, ENSECAT00000018162.3
    Conserved Domains (2) summary
    smart00241
    Location:213 → 463
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:341 → 461
    Zona_pellucida; Zona pellucida-like domain

  2. XM_005598881.2 → XP_005598938.2  pancreatic secretory granule membrane major glycoprotein GP2

    UniProtKB/TrEMBL
    F6WVV0
    Conserved Domains (2) summary
    smart00241
    Location:213 → 463
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:341 → 461
    Zona_pellucida; Zona pellucida-like domain
Nucleotide Protein
Heading Accession and Version

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