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TRAF3IP3 TRAF3 interacting protein 3 [ Equus caballus (horse) ]

Gene ID: 100051575, updated on 8-Mar-2024

Summary

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Official Symbol
TRAF3IP3provided by VGNC
Official Full Name
TRAF3 interacting protein 3provided by VGNC
Primary source
VGNC:VGNC:24459
See related
Ensembl:ENSECAG00000011355
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TRAF3IP3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (25720271..25743720, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 5 NC_009148.2 (28478940..28502417, complement)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 6 Neighboring gene chromosome 5 C1orf74 homolog Neighboring gene hydroxysteroid 11-beta dehydrogenase 1 Neighboring gene G0/G1 switch 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
TRAF3-interacting JNK-activating modulator
Names
TRAF3-interacting JNK-activating modulator-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    25720271..25743720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001490938.5 → XP_001490988.2  TRAF3-interacting JNK-activating modulator isoform X1

    See identical proteins and their annotated locations for XP_001490988.2

    UniProtKB/TrEMBL
    A0A9L0TBG8
    Related
    ENSECAP00000083930.1, ENSECAT00000109750.1
    Conserved Domains (2) summary
    COG4372
    Location:217 → 410
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
    PRK10811
    Location:24 → 184
    rne; ribonuclease E; Reviewed

  2. XM_014739650.2 → XP_014595136.1  TRAF3-interacting JNK-activating modulator isoform X2

    UniProtKB/TrEMBL
    A0A9L0SF70
    Related
    ENSECAP00000072841.1, ENSECAT00000098377.1
    Conserved Domains (1) summary
    COG4372
    Location:3 → 144
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]

RNA

  1. XR_290262.3 RNA Sequence

    Related
    ENSECAT00000128426.1
Nucleotide Protein
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